FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005485879

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005485879
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19543271
Sequences flagged as poor quality0
Sequence length8
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AACTTGAC1885515696.4790182769302No Hit
NACTTGAC2625401.3433779841665197No Hit
ANCTTGAC422580.21622787710409377No Hit
AACTTGAA359250.18382286158749986No Hit
AGCTTGAC351030.17961681030775248No Hit
AACTTGGC275160.1407952640067264No Hit
AAGTTGAC255540.13075600292294978No Hit
AACTGGAC225490.11537986655355698No Hit
AACTTGAG219070.11209484840076157No Hit
CACTTGAC204840.10481356984713562No Hit
AACTTGCC199020.10183556273665754No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)