FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005485902

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005485902
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20874474
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGCGCGA32900.085.23311
ACGACCG33650.080.940021
GTGCGAC37100.077.557551
CGCCGAA32050.077.442091
TTTGCGC34050.077.408891
CGGTACG33500.077.368451
GCGCTAG35350.072.698111
TTACGCG12150.070.403379
GACGCGT34950.068.292941
AACCGCG40950.065.438391
TTACCCG39450.065.328261
GGCGACT42250.064.984531
CGAACGC41550.064.8458561
TCGTACG40250.064.837228
CGAACTA41450.064.6490251
GCGCGTA37150.064.6428451
ATAACGC37600.062.7008481
CGATCGG41500.062.4540441
CCGCTAT40950.062.0413171
CGCGGTA41200.061.8425641
Produced by FastQC (version 0.11.5)