FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005485909

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005485909
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18850805
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGACGCT25350.093.2238856
ACGACGC27500.085.9450455
CACGACG28200.083.811664
GACGCTC38550.061.4912347
TACACGA44150.054.857762
CTACACG45950.053.3107571
ACGCTCT45450.052.7935078
ACACGAC56550.042.3076023
CGCTCTT59850.040.212439
TCTTCCG78750.06.77516510-14
CGCTGAG38950.06.5512121
CTTCCGA86600.06.3451810-14
AACGGGG35201.1914381E-95.79931161
TCCGATC101100.05.66466615-19
TAACCCT718300.05.6112096
TTCCGAT101200.05.55870710-14
CTAACCC759050.05.5015885
ACGGGAG45502.5465852E-115.4478931
CCTAACC783650.05.33813574
CCCTAAC797700.05.3168373
Produced by FastQC (version 0.11.5)