FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005485980

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005485980
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19175809
Sequences flagged as poor quality0
Sequence length8
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCAATTC1845124296.22145276895489No Hit
NGCAATTC3448351.7982813658604964No Hit
AGCACTTC440280.22960178629230196No Hit
AGCAATTA378790.19753534257668084No Hit
AGCAGTTC270120.14086498254128416No Hit
AGCATTTC241650.1260181513072017No Hit
CGCAATTC229540.11970290275628007No Hit
ANCAATTC226490.11811235708490837No Hit
AGCAATTT225880.11779424795063403No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)