FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005486055

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005486055
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20152940
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTACGCG11750.080.2000059
CGGTACG30000.078.8933641
ACGACCG31850.078.003331
TTTGCGC32300.076.9165951
TGCGCGA30800.076.128251
GTGCGAC34950.074.870151
CGCCGAA31850.071.772291
CCGCTAT39150.070.029811
GCGCTAG35000.068.882941
CGAACGC37600.067.247551
GCGCGTA33700.067.177941
GGCGACT40000.067.071611
CGTTGCG16000.066.145727
AACGCGT30250.065.664513
TTACCCG36450.065.336121
ATAACGC37150.065.094291
CGAACTA44750.064.38711
AACCGCG36600.063.260891
CGCGGTA40700.062.8478931
TCGCGAT25950.062.571938
Produced by FastQC (version 0.11.5)