Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005486084 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 20884488 |
Sequences flagged as poor quality | 0 |
Sequence length | 8 |
%GC | 49 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
CATAGCGA | 19945924 | 95.50592765309833 | No Hit |
NATAGCGA | 432197 | 2.0694641879657283 | No Hit |
CATAGCGC | 48118 | 0.23040066866853523 | No Hit |
CATAGCGT | 36663 | 0.17555134700932098 | No Hit |
CATAGCGG | 33626 | 0.1610094535235913 | No Hit |
CNTAGCGA | 30934 | 0.14811950381546343 | No Hit |
CATAGCAA | 28842 | 0.13810249980751266 | No Hit |
CATCGCGA | 27709 | 0.13267742067701158 | No Hit |
CATGGCGA | 25736 | 0.12323021756626257 | No Hit |
CATTGCGA | 21019 | 0.10064407612003702 | No Hit |
Adapter Content
Can't analyse adapters as read length is too short
Kmer Content
No overrepresented Kmers