FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005486142

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005486142
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20813272
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTACGCG13650.081.249699
TTTGCGC34350.078.818681
CGCCGAA32600.078.084821
GTGCGAC36150.075.708171
ACGACCG31300.074.981561
CGGTACG34800.072.72561
TGCGCGA30000.071.854581
ATAACGC40650.069.861011
GACGCGT34650.068.793891
TAGGCGC38250.067.8971251
GCGCTAG34750.067.325631
CGAACGC39200.066.6270141
AACGCGT28250.066.2007753
TTACCCG38550.066.0328141
TCGTACG42150.065.522488
TTCCGCG21000.064.893387
GGCGACT40700.064.7137761
GTACCGT48250.063.398368
CGATCGG39350.063.381581
GTTACGC32050.062.8752378
Produced by FastQC (version 0.11.5)