Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005486236 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 18967554 |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 43 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGACGCT | 2765 | 0.0 | 96.223045 | 6 |
ACGACGC | 2920 | 0.0 | 91.11531 | 5 |
CACGACG | 2960 | 0.0 | 90.61878 | 4 |
GACGCTC | 3935 | 0.0 | 67.79766 | 7 |
TACACGA | 4520 | 0.0 | 60.95662 | 2 |
CTACACG | 4845 | 0.0 | 57.872967 | 1 |
ACGCTCT | 4855 | 0.0 | 55.24896 | 8 |
ACACGAC | 5190 | 0.0 | 52.660156 | 3 |
CGCTCTT | 6470 | 0.0 | 41.570114 | 9 |
TCTTCCG | 9170 | 0.0 | 7.020263 | 10-14 |
CGCCAAT | 1565 | 2.0058013E-5 | 7.0169387 | 1 |
CTTCCGA | 9845 | 0.0 | 6.9365726 | 10-14 |
AACGGGG | 3505 | 0.0 | 6.683943 | 1 |
CGTAAAG | 2380 | 1.2062628E-7 | 6.4597116 | 1 |
CGCAAAG | 2995 | 9.731593E-10 | 6.3554645 | 1 |
TAACCCT | 84540 | 0.0 | 5.9940877 | 6 |
CGATGGG | 3700 | 9.822543E-11 | 5.9359508 | 1 |
CTAACCC | 90635 | 0.0 | 5.8389544 | 5 |
ACCCTAA | 91635 | 0.0 | 5.7603083 | 2 |
TTCCGAT | 12385 | 0.0 | 5.712991 | 10-14 |