FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005486255

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005486255
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19498858
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGCGCGA30600.081.77781
ACGACCG30350.078.352971
CGGTACG32000.077.971371
TTTGCGC31100.077.40451
GCGCTAG34500.075.0783841
CGCCGAA31300.074.104681
TTACGCG12400.068.401389
GTGCGAC34400.067.639341
GACGCGT30700.067.211171
CGAACTA39600.066.70261
GTTCGCG42900.065.396818
TAGGCGC34950.065.1094361
CGAACGC34600.064.499221
ATAACGC35050.063.8798871
AACCGCG37900.063.7096861
CGTTGCG15750.063.5186777
TAAACCG42600.063.2075461
GCGCGTA33800.062.9951361
CCGCTAT36850.062.7451741
TCACGCG26450.062.490238
Produced by FastQC (version 0.11.5)