FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005486257

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005486257
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20264177
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGCGCGA28950.079.6382451
TTTGCGC31700.077.116431
CGGTACG30850.076.86871
CGCCGAA29200.076.700511
GTGCGAC33650.075.692681
TTACGCG12300.073.081639
ACGACCG30250.070.16691
GCGCTAG32450.068.567541
ATAACGC40300.067.016391
TCGTACG41750.066.6753548
CCGCTAT39000.066.622891
GTACGCT31650.065.735328
TCACGCG30450.065.707118
TTACCCG39050.065.4131
GGCGACT40300.064.836991
TTCCGCG18900.064.820967
CGAACGC38350.063.7442131
AACCGCG40450.063.691841
GCGCGTA32100.063.6149061
AACGCGT29300.063.3385733
Produced by FastQC (version 0.11.5)