FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005486300

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005486300
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18713637
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGCGCGA28600.078.248651
TTACGCG11800.077.4076169
CGCCGAA27900.076.017791
CGGTACG28850.075.796091
TTTGCGC26800.075.590361
ACGACCG26150.075.511571
GACGCGT31700.074.2878951
GTGCGAC31000.072.662521
GGCGACT35100.068.7588041
ATAACGC35450.067.254731
TTACCCG32450.066.485781
TCGCGAT22450.065.2279368
CCGCTAT37450.065.22531
CGAACGC33450.063.6236151
AACGCGT26500.063.4659463
GCGCTAG29850.062.72161
CCTTACG37850.062.2173421
GCCGGAT38500.061.73681
GCGCGTA32450.061.3021431
ACGCCGA38450.061.246461
Produced by FastQC (version 0.11.5)