FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005486364

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005486364
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22680675
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGACGC41550.0109.393455
CGACGCT42350.0106.815826
CACGACG44550.0103.1668554
GACGCTC55900.081.183167
TACACGA60600.076.270612
CTACACG62900.073.533221
ACACGAC65900.070.183323
ACGCTCT66200.068.442448
CGCTCTT89100.050.7707069
CTTCCGA112500.09.47246610-14
TCTTCCG109350.09.16194210-14
TTCCGAT131200.08.453876510-14
TCCGATC130900.07.963691715-19
CGTAGAG34300.07.9321551
CCGATCT147500.07.342665715-19
CGATCTA35900.07.067548815-19
ACGGGAG47150.05.92632531
AACGGAG40902.0190782E-105.57342241
AACGGGG39856.002665E-105.53575041
CTAACCC477650.05.4030015
Produced by FastQC (version 0.11.5)