FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005486415

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005486415
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19335526
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTACGCG11350.082.395139
CGCCGAA28850.077.312431
TGCGCGA30650.077.066811
TTTGCGC28800.072.1142651
GTGCGAC33750.069.988081
ATAACGC35900.068.4447561
GCGCTAG32900.067.572971
CGGTACG31500.067.558161
GGCGACT38900.067.490121
CCGCTAT37750.065.671671
GACGCGT29050.064.948461
TTACCCG36400.064.0891651
TAGGCGC36900.063.8153041
ACGACCG28250.063.6813131
GCGCGTA32200.062.455711
GCCGGAT38100.061.997321
GTTACGC29550.061.823098
CGAACGC35450.061.6808431
ACGCCGA40450.061.6497341
CGAACTA44250.061.3134771
Produced by FastQC (version 0.11.5)