FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005486416

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005486416
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19335526
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGACGC26950.0101.680475
CGACGCT27100.099.780136
CACGACG30900.088.682254
GACGCTC39500.068.641347
TACACGA46100.059.9484522
CTACACG51200.055.8673481
ACGCTCT50150.054.062238
ACACGAC55500.049.7659153
CGCTCTT63950.042.736029
AACGGGG37550.06.853881
TCTTCCG94950.06.840950510-14
CTTCCGA102600.06.556982510-14
TAACCCT763950.06.41484746
ACGGGAG43850.06.2045541
CTAACCC814400.06.0975775
AACCCTA824400.06.0385011
ACCCTAA832500.06.020712
CCTAACC835550.05.96056844
CCCTAAC847000.05.93129973
TTCCGAT124100.05.748131810-14
Produced by FastQC (version 0.11.5)