FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005486484

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005486484
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20582470
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTACGCG12000.086.987469
TTTGCGC35200.078.371141
CGGTACG30900.075.7790151
CGCCGAA31650.075.13931
TGCGCGA28450.074.331521
ACGACCG32550.071.038461
GCGCTAG35600.070.0909351
GTGCGAC34450.069.66941
GACGCGT34300.068.694071
GGCGACT42100.067.959811
TTACCCG37500.066.7347951
TCGTACG42650.065.606338
ATAACGC39400.064.816661
TAGGCGC37550.064.307481
CGAACTA40950.064.150211
GCCGGAT39100.064.003961
CGAACGC39000.062.6670571
CCGCTAT42200.062.0766141
GTTACGC31750.061.6449558
GTACGCT30100.061.1708768
Produced by FastQC (version 0.11.5)