FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005486497

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005486497
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17764083
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGACGCT24500.0100.279526
ACGACGC25300.097.733815
CACGACG26550.092.859024
GACGCTC35950.068.13917
TACACGA40600.061.6675072
ACGCTCT43850.056.5242928
CTACACG44800.055.9344181
ACACGAC44950.055.3426253
CGCTCTT55700.044.23879
TAACCCT494650.05.68476256
CTAACCC516250.05.64646865
TCTTCCG106700.05.58319510-14
CGCTGAG36753.2232492E-95.5662631
GTTCCGA52800.05.4933465
CCTAACC536900.05.40227034
CGTAGAG27359.988073E-65.34239151
CCCTAAC541250.05.319713
AACGGAG36307.9800884E-85.23274761
AACCCTA542250.05.20056771
ACCCTAA553650.05.15134432
Produced by FastQC (version 0.11.5)