FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005486551

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005486551
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21107846
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTACGCG12900.085.981189
TGCGCGA29600.078.447861
TTTGCGC33950.075.924261
CGCCGAA33450.074.8761751
GTGCGAC36100.072.61611
CGGTACG32950.072.4666061
ACGACCG31000.069.487391
CCGCTAT42000.069.369611
ATAACGC38600.069.237181
GGCGACT39600.067.857571
GCGCTAG34650.066.171661
TTACCCG39700.065.66341
GACGCGT32800.065.451431
GTACCGT45450.064.758838
TCACGCG27450.064.439828
TCGTACG40800.063.9659968
CGAACGC37800.063.5551
CGCGGTA37750.063.2523161
AACCGCG39350.063.09281
ACGCCGA42700.062.0760961
Produced by FastQC (version 0.11.5)