FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005486600

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005486600
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18247605
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGACGCT26800.0102.2526866
ACGACGC27250.0100.8298655
CACGACG29150.095.252574
GACGCTC39500.069.560237
TACACGA44650.062.379132
CTACACG45050.062.2351071
ACACGAC47250.059.0719573
ACGCTCT47350.057.8736888
CGCTCTT58850.046.3186079
CGTAGAG28000.07.56204031
TCTTCCG110200.06.026304710-14
TAACCCT481400.05.6473266
CGCTGAG36302.4283509E-95.63184171
CTAACCC495050.05.6087525
CCCTAAC518100.05.4432523
CCTAACC515350.05.3878194
AACCCTA520200.05.3756061
CTTCCGA133800.05.3643410-14
ACCCTAA533150.05.18328572
Produced by FastQC (version 0.11.5)