FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005486612

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005486612
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19269490
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGACGCT27200.0103.0922856
ACGACGC27750.0101.570185
CACGACG30950.091.5368044
GACGCTC39750.070.725757
TACACGA43850.065.3842242
CTACACG48450.061.1698881
ACGCTCT47900.058.993358
ACACGAC53000.054.2744453
CGCTCTT62400.045.4013149
CGTTGAG26951.8189894E-127.60283761
TCTTCCG110500.06.09813610-14
TAACCCT777800.05.88753186
CTAACCC822200.05.73697765
AACCCTA834700.05.63711641
CGTAGAG27401.690707E-65.608481
CCTAACC852900.05.58144764
CCCTAAC856100.05.5436723
CGATGAG29058.457282E-75.5418271
ACCCTAA861900.05.5329152
CGATGGG35759.484211E-95.5266781
Produced by FastQC (version 0.11.5)