Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005486613 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 20332105 |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 43 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TGCGCGA | 3080 | 0.0 | 80.74575 | 1 |
TTACGCG | 1375 | 0.0 | 79.5285 | 9 |
ACGACCG | 3165 | 0.0 | 74.65989 | 1 |
TTTGCGC | 3485 | 0.0 | 74.08265 | 1 |
CGCCGAA | 3100 | 0.0 | 73.40217 | 1 |
GACGCGT | 3390 | 0.0 | 73.14678 | 1 |
CGGTACG | 3195 | 0.0 | 72.13271 | 1 |
CGTTGCG | 1540 | 0.0 | 71.94809 | 7 |
TTACCCG | 3845 | 0.0 | 67.336105 | 1 |
GCGCTAG | 3510 | 0.0 | 67.32151 | 1 |
CGAACGC | 3660 | 0.0 | 66.35584 | 1 |
GCGCGTA | 3670 | 0.0 | 65.38014 | 1 |
GGCGACT | 4050 | 0.0 | 65.36836 | 1 |
CCGCTAT | 3975 | 0.0 | 65.13392 | 1 |
GTGCGAC | 3200 | 0.0 | 64.72684 | 1 |
CGCGGTA | 4075 | 0.0 | 64.072464 | 1 |
ATAACGC | 3690 | 0.0 | 62.25872 | 1 |
CTTACCG | 4290 | 0.0 | 61.881397 | 1 |
GTTACGC | 3135 | 0.0 | 61.445866 | 8 |
GTACCGT | 4455 | 0.0 | 61.283306 | 8 |