FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005486632

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005486632
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19032986
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGACGCT28950.099.6622546
ACGACGC30200.095.297115
CACGACG32550.088.639714
GACGCTC40250.071.502437
TACACGA44950.065.176932
CTACACG46450.062.6253471
ACGCTCT50550.056.9331938
ACACGAC55000.052.6042143
CGCTCTT65250.044.773949
TCTTCCG108700.06.362570310-14
TAACCCT762050.05.91702136
CTTCCGA130150.05.82641310-14
CTAACCC806950.05.8213625
CCTAACC841800.05.58036044
CCCTAAC848650.05.5794953
ACCCTAA842100.05.54580352
AACCCTA826900.05.5457551
Produced by FastQC (version 0.11.5)