FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005486674

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005486674
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17751579
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGACGCT23500.0101.182256
ACGACGC24450.097.250835
CACGACG28450.084.596854
GACGCTC35450.068.301237
TACACGA41750.058.598972
ACGCTCT43400.055.455458
CTACACG44700.054.826311
ACACGAC45750.052.7640383
CGCTCTT55450.043.274759
TCTTCCG98000.05.79967310-14
TAACCCT462750.05.3263646
CTTCCGA119100.05.320019210-14
CGAAGGT23501.8815976E-45.2440393
CGTTGAG23902.1125044E-45.20358561
CTAACCC479400.05.0506445
AACCCTA503850.05.02373271
Produced by FastQC (version 0.11.5)