FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005486676

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005486676
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17879934
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGACGC24450.0102.535175
CGACGCT25000.099.410766
CACGACG26800.093.814574
GACGCTC35900.069.025727
TACACGA38050.066.9669952
ACACGAC42450.059.9107933
ACGCTCT42350.058.3408748
CTACACG45200.056.0389441
CGCTCTT55850.044.498259
CGCTGAG33652.2719178E-95.87395951
TCTTCCG104900.05.80198110-14
ACGGGAG38252.3283064E-105.7417211
TAACCCT508000.05.66247226
CGATGAG28706.645132E-75.6116821
CTAACCC522450.05.36712655
CGGTGAT38258.038114E-95.35893961
CTTCCGA123950.05.237619410-14
AACCCTA549150.05.21177157
CCTAACC544650.05.2015754
CCCTAAC546650.05.1825443
Produced by FastQC (version 0.11.5)