FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005486698

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005486698
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16638686
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGACCG24850.080.11931
TGCGCGA27500.078.520661
CGGTACG27550.078.378151
TTTGCGC28800.077.263741
TTACGCG10800.077.187779
GTGCGAC26950.077.135481
CGCCGAA25650.071.62771
GCGCGTA26600.070.170281
GACGCGT24800.067.884531
TAGGCGC32350.066.069831
GCGCTAG28350.065.580581
CGTTGCG12350.065.152597
CGAACGC30250.064.607151
ATAACGC30150.063.1219861
GGCGACT33200.062.61451
CCGCTAT33250.062.30021
TTACCCG33200.062.173551
GTACGCT24900.062.0095448
CCTTACG30950.061.9634061
CGAACGT17850.061.7424933
Produced by FastQC (version 0.11.5)