FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005486704

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005486704
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19026229
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTACGCG14200.084.23189
TTTGCGC33500.081.3716051
TGCGCGA30050.077.094541
ACGACCG28200.073.340891
GTGCGAC33150.073.191961
CGGTACG27050.072.946651
CGCCGAA30950.070.602391
GCGCTAG33950.068.453581
TTACCCG36750.068.209621
GACGCGT28150.068.019241
GCGCGTA31150.067.8029561
ATAACGC34400.066.920781
GTTACGC29500.065.611338
TCGTACG35900.064.818688
TCCGCGA31700.064.259398
TACGAAC39850.063.086871
CGAACGC35400.062.96591
TCGCGAT23350.062.7124948
CTTACCG42000.062.641491
CCGCTAT37200.062.47311
Produced by FastQC (version 0.11.5)