FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005486726

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005486726
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18847963
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGACGCT24600.089.561926
ACGACGC25300.087.702915
CACGACG26950.082.063844
GACGCTC33450.066.733187
TACACGA43150.052.1325262
ACGCTCT44900.048.746998
CTACACG48250.046.783041
ACACGAC52300.042.8499763
CGCTCTT56550.039.7297949
AACGGGG33806.366463E-116.26770541
TAACCCT706200.05.613646
CTAACCC747000.05.50396355
CGCTAAG16050.0096182855.46177151
CCTAACC774600.05.3827124
CCCTAAC783850.05.3572193
TCTTCCG97600.05.34644710-14
AACCCTA764650.05.29266451
ACCCTAA784250.05.2648462
GTTCCGA52701.8189894E-125.2286085
CGTTGAG26703.8079823E-55.19839951
Produced by FastQC (version 0.11.5)