FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005486727

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005486727
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21241277
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTACGCG12550.082.0241249
TTTGCGC32050.079.775721
CGCCGAA37300.075.577721
TGCGCGA30450.075.355491
ACGACCG28300.073.615841
GCGCTAG37150.072.1573641
TAGGCGC38850.070.12491
CGGTACG31750.069.9757841
TTACCCG40900.069.45971
GTACGCT30300.068.425888
GTGCGAC38400.068.290921
GGCGACT41600.066.014561
CGTTGCG15950.065.447917
TCACGCG32800.065.4206548
GTTACGC32800.064.978628
TCGTACG42550.064.741258
CGAACGC40600.064.052171
GTACCGT46750.064.042088
ATAACGC40150.063.862921
GTTCGCG43550.063.587578
Produced by FastQC (version 0.11.5)