FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005486838

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005486838
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15095180
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGACCG22800.078.755431
TGCGCGA24450.077.9006041
CGGTACG23600.076.701841
TTACGCG9600.074.757299
TTTGCGC25450.074.554031
GTGCGAC24350.073.44371
CGCCGAA22750.070.6202551
TTACCCG29950.070.148671
CCGCTAT29500.068.507981
GCGCTAG26050.067.813631
TCGTACG27550.066.5715268
TCCGCGA20750.066.0287868
GACGCGT22800.064.088431
GGCGACT31200.063.843161
CGTTGCG10950.063.554987
GTTCGCG32100.063.232838
GCGCGTA24650.063.1124841
CGAACGC28800.063.1053121
GTACCGT32050.062.652928
ACGCCGA27500.062.1231651
Produced by FastQC (version 0.11.5)