FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005486913

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005486913
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17262288
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTACGCG11450.093.027239
TTTGCGC29250.079.5581
TGCGCGA24650.076.408651
CGCCGAA28100.075.308911
ACGACCG27050.072.5865551
GCGCTAG30800.072.248761
GTTACGC27200.070.86168
ATAACGC31250.070.0448461
CGGTACG27050.069.360491
GGCGACT35550.066.891021
TTCCGCG15200.066.749337
TTACCCG32600.066.251931
GCGCGTA33500.066.208651
AACCGCG35350.066.035171
GTGCGAC27950.065.5659561
TCCGCGA24900.065.184898
TACGAAC37600.064.791291
TCGCGAT18900.064.025498
TCGTACG33700.063.8593948
TCGTTCG31100.062.4414028
Produced by FastQC (version 0.11.5)