FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005486987

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005486987
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19145505
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGCGCGA32550.086.013771
TTACGCG11550.082.216349
TTTGCGC26550.075.5966951
GTGCGAC34100.074.85331
CGCCGAA30450.072.123681
GCGCTAG32650.071.050271
ACGACCG28750.070.823671
TCGTACG38900.069.134248
CGAACGC34300.068.268441
CGGTACG28750.066.017781
AACGCGT23850.065.373313
CGACACG38000.065.065921
GTTACGC28200.065.0339668
GGCGACT36700.064.992911
ATAACGC39100.064.537321
CTTACCG40850.063.730771
GACGCGT32600.063.35181
TCCGCGA28150.063.0894178
GCGCGTA30150.062.9522741
TAGGCGC37100.061.5480041
Produced by FastQC (version 0.11.5)