FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005486996

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005486996
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17412307
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGCGCGA25850.083.817081
TTACGCG11300.083.39249
ACGACCG25950.082.093181
CGGTACG25600.077.251291
TTTGCGC27400.076.422061
GTGCGAC30000.072.222381
CGCCGAA26350.069.809851
GACGCGT30600.068.667811
CGAACGC33650.066.7652051
GTACCGT39000.066.725448
CGTTGCG13200.066.446647
TAGGCGC30500.066.270731
TTACCCG34500.066.173991
TCACGCG23500.065.70128
ATAACGC32350.065.1779251
GGCGACT31100.064.524631
GCGCGTA29550.064.46451
ACGCCGA33100.063.7010881
CCTTACG32850.063.0792161
GTTACGC28000.062.3908048
Produced by FastQC (version 0.11.5)