EGAF00005488113 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005488113
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	28931718
Sequences flagged as poor quality	0
Sequence length	76
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCT	123926	0.4283395821845077	No Hit
CCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAG	39361	0.13604791806694647	No Hit
GTTAGTTTTACCCTACTGATGATGTGTTGTTGCCATGGTAATCCTGCTCA	34651	0.11976820733563073	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GCTTGAA	50745	46.98428	70
CGTATGC	58170	42.563328	55
TCGTATG	58855	42.16902	54
ATGCCGT	57950	42.018074	58
TATGCCG	58850	41.821545	57
CTCGTAT	59935	41.607677	53
ACGGACA	22420	41.56696	18
TGCCGTC	59220	41.046066	59
TCTCGTA	59210	40.923256	52
GCCGTCT	59215	40.801323	60
CCGTCTT	58885	40.738777	61
CCGGACA	23025	40.65637	12
CGTCTTC	60125	39.92187	62
CGGACAG	23405	39.81761	19
ACACGGA	23655	39.470768	16
CGGACAC	23645	39.443058	13
ATCTCGT	61380	39.43086	51
TCACCCG	24075	39.3787	3
GTATGCC	63785	38.83842	56
CACCCGG	24975	37.833538	4