FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005490176

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005490176
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19941115
Sequences flagged as poor quality0
Sequence length80
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATACCGA7350.0031509866.04047473
CGATCGT10902.737237E-45.4313075
CGCATAG16351.1864959E-65.204558471
Produced by FastQC (version 0.11.5)