FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005490193

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005490193
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19239844
Sequences flagged as poor quality0
Sequence length80
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGCGTA6900.00154496226.436225471
CTCGTAT11358.1689446E-55.543165772
TCGTATG15755.606307E-75.404681774
CGCATAG15351.0940728E-55.06330174
Produced by FastQC (version 0.11.5)