FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005490201

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005490201
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24718744
Sequences flagged as poor quality0
Sequence length80
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGTATG23700.07.18337374
CTCGTAT15207.046765E-96.08703473
TATGCCG18255.0931703E-116.083833774
CGTATGC39350.05.3610474
GTAACGG20951.01154E-85.12310174
ATGCGTA10350.0046350845.00519946
Produced by FastQC (version 0.11.5)