FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005490221

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005490221
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27710208
Sequences flagged as poor quality0
Sequence length80
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGTATG22701.4551915E-115.54253474
CGCATAG48750.05.54097671
CGTATGC26950.05.355020574
CTCGTAT13901.0595353E-55.324397674
Produced by FastQC (version 0.11.5)