FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005490222

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005490222
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27710208
Sequences flagged as poor quality0
Sequence length80
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTGTAG156150.06.39941874
TCGTGTA176550.05.953480273
GTCGTGT189700.05.81390174
GCGTCGT239050.05.26391574
GATCGGA542100.05.14084274
CCTTTCG115100.05.112584674
AGAGCGT342600.05.03404774
Produced by FastQC (version 0.11.5)