FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005490263

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005490263
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31588960
Sequences flagged as poor quality0
Sequence length80
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGTATG37800.09.29878274
CGTATGC50300.07.355738674
TATGCCG31300.07.210807373
ATATCGC5400.0069357896.85204969
GTCGTAT19500.06.83071773
CTCGTAT22750.06.83065274
TATCGTA13802.530378E-75.898673572
ATCGTAT27350.05.54652374
Produced by FastQC (version 0.11.5)