FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005490297

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005490297
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27659779
Sequences flagged as poor quality0
Sequence length80
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGAATCG13500.08.22212474
TCGTATG27000.06.98880674
CTCGTAT16953.2923708E-106.11202174
CGTATGC34950.06.03426374
TATGCCG23600.05.957717473
TAACGTA8400.0022052075.726277473
CGAATCT119050.05.376814473
Produced by FastQC (version 0.11.5)