FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005490298

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005490298
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27659779
Sequences flagged as poor quality0
Sequence length80
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGATCGT13358.5564534E-75.81871135
TCGTATC9109.193971E-45.692824470
TAACGTT8700.0033301485.530798471
ACGCTTC82050.05.4095462
GACGCTT107150.05.2821121
TATCACG9950.00284382125.205363368
Produced by FastQC (version 0.11.5)