Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005490302 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 17895970 |
Sequences flagged as poor quality | 0 |
Sequence length | 20-80 |
%GC | 51 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGCATAT | 1500 | 1.0186341E-9 | 7.3518476 | 73 |
GGCGCAT | 2680 | 5.34219E-8 | 6.072558 | 74 |
CCGTCTC | 3310 | 3.430614E-9 | 5.771841 | 74 |
AGACGTC | 3045 | 1.195458E-7 | 5.5770245 | 74 |
AACTCGG | 1680 | 0.0037503846 | 5.4753594 | 74 |
GCGCATA | 1965 | 1.09625034E-7 | 5.3673453 | 72 |
ATTGCCG | 4245 | 0.0 | 5.2672057 | 72 |