FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005490312

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005490312
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21113839
Sequences flagged as poor quality0
Sequence length80
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGATCGT8751.8140781E-77.611535
CCTAACG6750.0087125726.02922470
TCGATCG12055.528611E-65.8335494
CGAATTA8650.00312615515.560398673
GACGCTT66150.05.03263761
Produced by FastQC (version 0.11.5)