FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005490404

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005490404
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19904648
Sequences flagged as poor quality0
Sequence length80
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGATCGT8255.805632E-77.62216955
CGTTACG5500.0082911136.726626415
TCGATCG10007.972345E-55.9185244
CGTATAG9400.00139168215.509707567
TGTATCG8150.0097725435.453868474
ATAACGG12553.632142E-45.01748774
Produced by FastQC (version 0.11.5)