FastQCFastQC Report
Wed 8 May 2024
EGAF00005490787

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005490787
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences56928
Total Bases17.1 Mbp
Sequences flagged as poor quality0
Sequence length301
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC990.17390387858347386No Hit
CTTACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC880.15458122540753233No Hit
ATATCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC860.1510680157391793No Hit
TTATCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC840.1475548060708263No Hit
ATAACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC780.1370151770657673No Hit
ACATCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC770.13525857223159077No Hit
ATCACCTACGGGAGGCAGCAGTGGGGAATATTGCGCAATGGGGGCAACCC770.13525857223159077No Hit
TTTACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC770.13525857223159077No Hit
TAATCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC750.1317453625632378No Hit
TCATCCTACGGGAGGCAGCAGTGGGGAATATTGCGCAATGGGGGCAACCC740.12998875772906127No Hit
ACCACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC740.12998875772906127No Hit
TTGTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC740.12998875772906127No Hit
ACCTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC740.12998875772906127No Hit
TCAACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC740.12998875772906127No Hit
CTATCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC740.12998875772906127No Hit
CCATCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC730.12823215289488477No Hit
TTTTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC730.12823215289488477No Hit
CAATCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC730.12823215289488477No Hit
ATCTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC720.12647554806070826No Hit
ATGTCCTACGGGAGGCAGCAGTGGGGAATATTGCGCAATGGGGGCAACCC720.12647554806070826No Hit
TTCTCCTACGGGAGGCAGCAGTGGGGAATATTGCGCAATGGGGGCAACCC710.12471894322653176No Hit
CTCTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC710.12471894322653176No Hit
TCATCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC710.12471894322653176No Hit
ATCACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC710.12471894322653176No Hit
TTAACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC700.12296233839235525No Hit
TCCACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC700.12296233839235525No Hit
TACTCCTACGGGAGGCAGCAGTGGGGAATATTGCGCAATGGGGGCAACCC690.12120573355817875No Hit
CTTTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC690.12120573355817875No Hit
ACAACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC690.12120573355817875No Hit
ATAACCTACGGGAGGCAGCAGTGGGGAATATTGCGCAATGGGGGCAACCC690.12120573355817875No Hit
CTAACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC680.11944912872400226No Hit
ACGTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC680.11944912872400226No Hit
TACACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC680.11944912872400226No Hit
CAATCCTACGGGAGGCAGCAGTGGGGAATATTGCGCAATGGGGGCAACCC680.11944912872400226No Hit
TTCCCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC680.11944912872400226No Hit
CACTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC670.11769252388982573No Hit
CACTCCTACGGGAGGCAGCAGTGGGGAATATTGCGCAATGGGGGCAACCC670.11769252388982573No Hit
ATTTCCTACGGGAGGCAGCAGTGGGGAATATTGCGCAATGGGGGCAACCC670.11769252388982573No Hit
TTATCCTACGGGAGGCAGCAGTGGGGAATATTGCGCAATGGGGGCAACCC670.11769252388982573No Hit
ACTTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC670.11769252388982573No Hit
TGCACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC670.11769252388982573No Hit
TCCACCTACGGGAGGCAGCAGTGGGGAATATTGCGCAATGGGGGCAACCC660.11593591905564925No Hit
TTAACCTACGGGAGGCAGCAGTGGGGAATATTGCGCAATGGGGGCAACCC660.11593591905564925No Hit
TTCACCTACGGGAGGCAGCAGTGGGGAATATTGCGCAATGGGGGCAACCC660.11593591905564925No Hit
CCACCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC660.11593591905564925No Hit
ATACCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC660.11593591905564925No Hit
TAGTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC650.11417931422147273No Hit
CTGTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC650.11417931422147273No Hit
CCCCCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC650.11417931422147273No Hit
CACACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC650.11417931422147273No Hit
ATATCCTACGGGAGGCAGCAGTGGGGAATATTGCGCAATGGGGGCAACCC650.11417931422147273No Hit
TCCTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC650.11417931422147273No Hit
TACTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC640.11242270938729623No Hit
AACTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC640.11242270938729623No Hit
TCAACCTACGGGAGGCAGCAGTGGGGAATATTGCGCAATGGGGGCAACCC640.11242270938729623No Hit
TCACCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC640.11242270938729623No Hit
AAAACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC630.11066610455311975No Hit
CCTTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC630.11066610455311975No Hit
CTACCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC630.11066610455311975No Hit
ATAGCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC630.11066610455311975No Hit
TGGTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC630.11066610455311975No Hit
TATTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC630.11066610455311975No Hit
TAAACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC620.10890949971894323No Hit
CAAACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC620.10890949971894323No Hit
CCATCCTACGGGAGGCAGCAGTGGGGAATATTGCGCAATGGGGGCAACCC620.10890949971894323No Hit
ACACCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC620.10890949971894323No Hit
CCACCCTACGGGAGGCAGCAGTGGGGAATATTGCGCAATGGGGGCAACCC620.10890949971894323No Hit
AATTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC620.10890949971894323No Hit
ACTTCCTACGGGAGGCAGCAGTGGGGAATATTGCGCAATGGGGGCAACCC620.10890949971894323No Hit
ACCTCCTACGGGAGGCAGCAGTGGGGAATATTGCGCAATGGGGGCAACCC620.10890949971894323No Hit
TCTACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC610.10715289488476673No Hit
GTATCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC610.10715289488476673No Hit
TTTTCCTACGGGAGGCAGCAGTGGGGAATATTGCGCAATGGGGGCAACCC610.10715289488476673No Hit
CCCACCTACGGGAGGCAGCAGTGGGGAATATTGCGCAATGGGGGCAACCC610.10715289488476673No Hit
GCCACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC610.10715289488476673No Hit
TAGACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC610.10715289488476673No Hit
CCAACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC610.10715289488476673No Hit
AGCTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC610.10715289488476673No Hit
CGGTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC610.10715289488476673No Hit
GTCACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC610.10715289488476673No Hit
AGATCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC610.10715289488476673No Hit
TTTCCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC610.10715289488476673No Hit
TGGACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC600.10539629005059022No Hit
ACATCCTACGGGAGGCAGCAGTGGGGAATATTGCGCAATGGGGGCAACCC600.10539629005059022No Hit
CATACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC600.10539629005059022No Hit
TATACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC600.10539629005059022No Hit
ATTACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC600.10539629005059022No Hit
ATGTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC600.10539629005059022No Hit
ACCCCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC600.10539629005059022No Hit
TCAGCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC600.10539629005059022No Hit
GCCACCTACGGGAGGCAGCAGTGGGGAATATTGCGCAATGGGGGCAACCC590.10363968521641372No Hit
GTTACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC590.10363968521641372No Hit
CAACCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC590.10363968521641372No Hit
TTTCCCTACGGGAGGCAGCAGTGGGGAATATTGCGCAATGGGGGCAACCC590.10363968521641372No Hit
TCTTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC590.10363968521641372No Hit
CAGTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC590.10363968521641372No Hit
TTCACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC590.10363968521641372No Hit
TGATCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC590.10363968521641372No Hit
GTTTCCTACGGGAGGCAGCAGTGGGGAATATTGCGCAATGGGGGCAACCC590.10363968521641372No Hit
TCGTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC590.10363968521641372No Hit
AAACCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC580.1018830803822372No Hit
TCCCCCTACGGGAGGCAGCAGTGGGGAATATTGCGCAATGGGGGCAACCC580.1018830803822372No Hit
AGCACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC580.1018830803822372No Hit
CTGACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC580.1018830803822372No Hit
GTTCCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC580.1018830803822372No Hit
ATGCCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC580.1018830803822372No Hit
GTGCCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC580.1018830803822372No Hit
CAGACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC580.1018830803822372No Hit
CCCACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC580.1018830803822372No Hit
TTGGCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC570.10012647554806071No Hit
ATTTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC570.10012647554806071No Hit
ACTACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC570.10012647554806071No Hit
CGCTCCTACGGGAGGCAGCAGTGGGGAATATTGCGCAATGGGGGCAACCC570.10012647554806071No Hit
GCATCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC570.10012647554806071No Hit
AATACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC570.10012647554806071No Hit
TTACCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC570.10012647554806071No Hit
TCACCCTACGGGAGGCAGCAGTGGGGAATATTGCGCAATGGGGGCAACCC570.10012647554806071No Hit
TCTCCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC570.10012647554806071No Hit
AGGACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC570.10012647554806071No Hit
CGTACCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC570.10012647554806071No Hit
GTACCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC570.10012647554806071No Hit
TACGCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGC570.10012647554806071No Hit
CTCTCCTACGGGAGGCAGCAGTGGGGAATATTGCGCAATGGGGGCAACCC570.10012647554806071No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)