Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005490795 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 75299 |
Sequences flagged as poor quality | 0 |
Sequence length | 301 |
%GC | 47 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGAACCT | 35 | 0.0 | 295.00003 | 1 |
CGACCTA | 110 | 0.0 | 295.00003 | 2 |
TAGCCCT | 35 | 0.0 | 295.00003 | 1 |
GTCACCT | 35 | 0.0 | 295.00003 | 1 |
TGAGCCT | 35 | 0.0 | 295.00003 | 1 |
GCTCCTA | 110 | 0.0 | 295.00003 | 2 |
GCCCCTA | 100 | 0.0 | 295.0 | 2 |
GCCCCCT | 20 | 6.146729E-8 | 295.0 | 1 |
ATCCTCG | 10 | 8.449343E-4 | 295.0 | 3 |
AATCCTA | 215 | 0.0 | 295.0 | 2 |
GTCGCCT | 10 | 8.449343E-4 | 295.0 | 1 |
TGCCCCT | 30 | 3.6379788E-12 | 295.0 | 1 |
AGATCCT | 25 | 5.2568794E-10 | 295.0 | 1 |
GCGACCT | 10 | 8.449343E-4 | 295.0 | 1 |
TACCACG | 10 | 8.449343E-4 | 295.0 | 3 |
CTTCCCT | 15 | 7.213561E-6 | 295.0 | 1 |
CTATCCT | 15 | 7.213561E-6 | 295.0 | 1 |
AGCCCTA | 100 | 0.0 | 295.0 | 2 |
TAGACCT | 40 | 0.0 | 295.0 | 1 |
GGGTCCT | 40 | 0.0 | 295.0 | 1 |