Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005490949 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 78040 |
Sequences flagged as poor quality | 0 |
Sequence length | 301 |
%GC | 47 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTACCTA | 110 | 0.0 | 295.00003 | 2 |
ACGCCTA | 110 | 0.0 | 295.00003 | 2 |
TAGCCTA | 95 | 0.0 | 295.00003 | 2 |
GTCCTAC | 375 | 0.0 | 295.0 | 3 |
GGTCCTA | 120 | 0.0 | 295.0 | 2 |
AGGACCT | 30 | 3.6379788E-12 | 295.0 | 1 |
CGCGCCT | 15 | 7.2145685E-6 | 295.0 | 1 |
GCGCCCT | 30 | 3.6379788E-12 | 295.0 | 1 |
TGGCCTA | 130 | 0.0 | 295.0 | 2 |
CGTTCCT | 50 | 0.0 | 295.0 | 1 |
GGCCCTA | 135 | 0.0 | 295.0 | 2 |
TTCCCTA | 125 | 0.0 | 295.0 | 2 |
TGACCTA | 100 | 0.0 | 295.0 | 2 |
TACGCCT | 30 | 3.6379788E-12 | 295.0 | 1 |
AGCGCCT | 15 | 7.2145685E-6 | 295.0 | 1 |
CGAGCCT | 30 | 3.6379788E-12 | 295.0 | 1 |
ACGTCCT | 15 | 7.2145685E-6 | 295.0 | 1 |
TTGCCTA | 70 | 0.0 | 295.0 | 2 |
GGCGCCT | 30 | 3.6379788E-12 | 295.0 | 1 |
CGCACCT | 15 | 7.2145685E-6 | 295.0 | 1 |