FastQCFastQC Report
Fri 10 May 2024
EGAF00005490968

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005490968
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences101
Total Bases30.4 kbp
Sequences flagged as poor quality0
Sequence length301
%GC47

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGAAAACCACCATTACCAGCATTAACCGTCAAACTATCAAAATATAACG10.9900990099009901No Hit
CACCGGAGGCGGCTTTTTGACCGCCTCCAAACAATTTAGACATGGCGCCA10.9900990099009901No Hit
AGCATCAGCACCCGCACGCTCCCAAGCATTAAGCTCAGGAACTGCAGCAG10.9900990099009901No Hit
CGCCGTTGGCGCTCTCCGTCTTTCTCCATTGCGTCGTGGCCTTGCTATTG10.9900990099009901No Hit
ATATTTACCATGCCGCTTTTCTTGGCACGATTAACCCTGATACCAATAAA10.9900990099009901No Hit
CTTTCCTGCTCCTGTTGAGTTTATTGCTGCCGTCATTGCTTCTTATGTTC10.9900990099009901No Hit
GGACTACAAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCCTCA10.9900990099009901No Hit
GGACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCCTCA10.9900990099009901No Hit
TCGCCAGCAATATCGGTATAAGTCAAAGCACCTTTAGCGTTACGGTACTG10.9900990099009901No Hit
GCAAGATTGGTGTTTTCCATAATAGACGCAACGCGAGCAGTCGACTCCTT10.9900990099009901No Hit
GGACTACTGGGTTTCTAATCCTGTTTGATACCCACACTTTCGAGCATCAG10.9900990099009901No Hit
GGACTACTGGGGTTTCTATGACTCTTGTCAACGTATAAGCCTTCCTGTTG10.9900990099009901No Hit
GCCTCGGTACGGTCAGGCATCCACGGCGCTTTAAAATAGTTGTTATAGAT10.9900990099009901No Hit
GGACTACCAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCCTCA10.9900990099009901No Hit
TCGCAACGGCTGCGGACGACCAGGGCGAGCGCCAGAACGTTTTTTACCTT10.9900990099009901No Hit
CACCTGTTTTACAGACACCTAAAGCTACATCGTCAACGTTATATTTTGAT10.9900990099009901No Hit
GGACTACCCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA10.9900990099009901No Hit
CTGGCTGCTGAACGCCCTCTTAAGGATATTCGCGATGAGTATAATTACCC10.9900990099009901No Hit
CAGAACGTTTTTTACCTTTAGACATTACATCACTCCTTCTGCACGTAATT10.9900990099009901No Hit
GGACTACCAGGGTTTCTAACCCTAGCACTTATTCCTCCTATTGAGCTGTA10.9900990099009901No Hit
GGACTACCCGGGTACCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCTCA10.9900990099009901No Hit
GGACTACAGGGGTTTCTAATCCTATTTGCTCCCCACGCTTTCGGGACTGA10.9900990099009901No Hit
GGACTACACGGGTATCTAATGGTGGCAGCGGGCCCTCTGCAGTATATACT10.9900990099009901No Hit
CTTGAATGGCCGATTTAATACCAGCATCACCCATGCCTACAGTATTGTTA10.9900990099009901No Hit
CAACGCGTCAGTTTTTGACAGCATCGTTAGTTGATGGCGAACGGTCGCAA10.9900990099009901No Hit
CTCCGTGGACAGATTTGTCATTGTGAGCATTTTCATCCCGACGTTGCGGC10.9900990099009901No Hit
GGACTACCAGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGCTCCTCA10.9900990099009901No Hit
GAACCATAAAAAAGCCTCCAAGATTTGGAGGCATGAAAACATACAATTGG10.9900990099009901No Hit
TCCAAAGGATAAACATCATAGGCAGTCGGGAGGGTAGTCGGAACCGAAGA10.9900990099009901No Hit
GGACTACTGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTACCTGA10.9900990099009901No Hit
CCCTAATGAGCTTAATCAAGATGATGCTCGTTATTGTTTCCGTTGCTGCC10.9900990099009901No Hit
CCAATTCATCCATTAACTTCTCAGTCACAGATACAAACTCATCACGACCG10.9900990099009901No Hit
CTGTTCAACCACTAATAGGTACGAAATCATGAGTCAAGTTACTGAACACT10.9900990099009901No Hit
TGTTTCAGGGTTATTTGAATATCTATAACAACTCTTTTCAAGCGCCGTGG10.9900990099009901No Hit
TGCAGAGTTTTATCGCTTCGATGACGCAGAAATATCGGCAAGTGTTAACT10.9900990099009901No Hit
GCATCCGAAAAGCCCGCATCTCTTCCAAGAGCTTGATGCGGTTATCCATC10.9900990099009901No Hit
GGACTACAGGGGTATCTACTTCGGTTTGACATCCACATTGGCGTGCTTCA10.9900990099009901No Hit
GGCTACACGGGTATCTAATCCTGTTTGATCCCCCCGCTTTCGTGCTTCAG10.9900990099009901No Hit
GGACTACTAGGGTATCTAATCCTGTTCGCTCCCCCAGCTTTCGCGCCTCA10.9900990099009901No Hit
GGACTACTAGGGTTTCTAATGGTCCCTGGAGTTTCTCGGCACAGAGCTCA10.9900990099009901No Hit
GCGCTCTAATCTCTGGGCATCTGGCTATGATGTTGATGGAACTGACCAAA10.9900990099009901No Hit
GGACTACTCGGGTTTCTAATAAGGGTTTGGGGACCTGAAATCATCTCATT10.9900990099009901No Hit
TCAGCGGCAGACTTGCCACCAAGTCCAACCAAATCAAGCAACTTATCAGA10.9900990099009901No Hit
ACTTATTCGCCACCATGATTATGACCAGTGTTTCCAGTCCGTTCAGTTGT10.9900990099009901No Hit
GGACTACAGGGGTATCTATGACTCTTGTCAACGTATAAGCCTTCCTGTTG10.9900990099009901No Hit
GCTTCTTGGGAAGTAGCGACAGCTTGGTTTTTAGTGAGTTGTTCCATTCT10.9900990099009901No Hit
GGACTACCAGGGTTTCTAATCCTGTTTGATACCCACACTTTCGAGCATCA10.9900990099009901No Hit
CAAGATTGGTGTTTTCCATAATAGACGCAACGCGAGCAGTAGACTCCTTC10.9900990099009901No Hit
GGACTACAGGGGTATCTAATCCTGTTTGATACCCACACTTTCGAGCATCA10.9900990099009901No Hit
GGACTACAAGGGTTTCTAATCCTGTTTGCTACCCACACTTTCGAGCCTCA10.9900990099009901No Hit
CAAATCACCAGAAGGCGGTTCCTGAATGAATGGGAAGCCTTCAAGAAGGT10.9900990099009901No Hit
ATTTCCTAGACCAATTAGAGCCAATCCCATCAGCTTTACCGTCTTTCCAG10.9900990099009901No Hit
CAGATTGGTGTTTTCCATAATAGACGCAACGCGCGCAGTAGACTCCTTCT10.9900990099009901No Hit
GGACTACTGGGGTATCTAATCCTGTTTGCTACCCACACTTTCGAGCATCA10.9900990099009901No Hit
TATTGTTATCGGTAGCAAGCACATCACCTTGAATGCCACCGGCGGCGGCT10.9900990099009901No Hit
GGACTACTAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA10.9900990099009901No Hit
ACTTCTGCGTCATGGAAGCGATAAAACTCTGCAGGTTGGATACGCCAATC10.9900990099009901No Hit
GGACTACAAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA10.9900990099009901No Hit
CTGATTCTGAACAGCTTCTTGGGAAGTAGCGACAGCTTGGTTTTTAGTGA10.9900990099009901No Hit
GGACTACAAGGGTATCTAATCCTGTTTGATACCCACACTTTCGAGCATCA10.9900990099009901No Hit
GGACTACCAGGGTATCTAATCCTGTTTGATACCCACACTTTCGAGCATCA10.9900990099009901No Hit
GGACTACCAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCA10.9900990099009901No Hit
GGACTACCCGGGTTTCTAATCCTGTTTGATCCCCACGCTTTCGTGCTTCA10.9900990099009901No Hit
GGTCCTAACCCGCTTTCTTACCCTTTTTTATACCCCCCCTTTCAGCAACA10.9900990099009901No Hit
GGACTACACGGGTATCTAATCCTGTTTGATACCCACACTTTCGAGCATCA10.9900990099009901No Hit
GGACTACCCGGGTATCTAATCCTGTTTGATACCCACACTTTCGAGCATCA10.9900990099009901No Hit
GGACTACTGGGGTTTCTAATCCTGTTTGATACCCACACTTTCGAGCATCA10.9900990099009901No Hit
GGACTACTAGGGTATCTAATCCTGTTTGATACCCACACTTTCGAGCATCA10.9900990099009901No Hit
GGACTACCAGGGTATCTAATCCTGTTTGCTACCCACACTTTCGAGCCTCA10.9900990099009901No Hit
TCAGTGTTTCCTGCGCGTACACGCAAGGTAAACGCGAACAATTCAGCGGC10.9900990099009901No Hit
GACTACAGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATGAG10.9900990099009901No Hit
GCCGAAGAAGCTGGAGTAACAGAAGTGAGAACCAGCTTATCAGAAAACAA10.9900990099009901No Hit
GGACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCTGA10.9900990099009901No Hit
GGACTACCAGGGTTTCTATGACTCTTGTCAACGTATAAGCCTTCCTGTTG10.9900990099009901No Hit
GGACTACCCGGGTATCTAATCCTGTTTGCTACCCACACTTTCGAGCCTCA10.9900990099009901No Hit
GGACTACCCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATCA10.9900990099009901No Hit
AGGAAGAGATTCTGTCTTTTCGTATGCAGGGCGTTGAGTTCGATAATGGT10.9900990099009901No Hit
TAGCGGTAAAGTTAGACCAAACCATGCAACCCACATAAACATTATTGCCC10.9900990099009901No Hit
ATTGAGGCTGGGAACAGTTACTGTAGCCGACGTTTTGGCGGCGCAACCTG10.9900990099009901No Hit
TGGCCTAACGACGTTTGGTCAGTTCCATCAACATCATAGCCAGATGCCCA10.9900990099009901No Hit
AGAAATTGTTCCAAGTATCGGCAACAGCTTTATCAATACCATGAAAAATA10.9900990099009901No Hit
GGACTACCGGGGTATCTAATCCTGTTTGATACCCACACTTTCGAGCATCA10.9900990099009901No Hit
GAAGCCAAGCATTGGGGATTGAGAACGAGTAGAAATGCCACACGCCTCAA10.9900990099009901No Hit
AACGTGAGAGTGTCAAAAACGATAACCCAACCATCAGCATGAGCCTGTCG10.9900990099009901No Hit
GGACTACCGGGGTTTCTAATCCTGTTTGATACCCACACTTTCGAGCATCA10.9900990099009901No Hit
GGACTACTGGGGTTTCTAATCCTGTTCGATACCCGCACTTTCGAGCTTCA10.9900990099009901No Hit
GGACTACAGGGGTTTCTAATCCTGTTTGATACCCACACTTTCGAGCATCA10.9900990099009901No Hit
GTTGCGTCTATTATGGAAAACACCAATCTTTCCAAGCAACAGCAGGTTTC10.9900990099009901No Hit
TTCATAGTGGAGGCCTCCAGCAATCTTGAACACTCATCCTTAATACCTTT10.9900990099009901No Hit
GGACTACTGGGGTATCTAATCCTGTTTGATACCCACACTTTCGAGCATCA10.9900990099009901No Hit
GGACTACTAGGGTTTCTAATCCTGTTTGATACCCACACTTTCGAGCATCA10.9900990099009901No Hit
GGACTACAAGGGTATCTAATGGTCCCCGGAGTTTCTCGGCACAGAGCTCA10.9900990099009901No Hit
GGACTACAAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATCA10.9900990099009901No Hit
CTGTTTATCCTTTGGATGGTCGCCATGATGGTGGTTATTATACCGTCAAG10.9900990099009901No Hit
GACCCTCGGCAGCAAGAACCATACGACCAATATCACGAAAATAGTCACGC10.9900990099009901No Hit
GGACTACAAGGGTATCTAATCCTATTTGCTCCCCACGCTTTCGTGCATGA10.9900990099009901No Hit
AATTCAGCGCCTTCCATGATGAGACAGGCCGTTTGAATGTTGACGGGATG10.9900990099009901No Hit
AAAAAGCGTCCTGCGTGTAGCGAACTGCGATGGGCATACTGTAACCATAA10.9900990099009901No Hit
GTTTGATGAATGCAATGCGACAGGCTCATGCTGATGGTTGGTTTATCGTT10.9900990099009901No Hit
CTTAATCCACTGTTCACCATAAACGTGACGATGAGGGACATAAAAAGTAA10.9900990099009901No Hit
CACCAAACATAACTCACCTCACTTAAGTGGCTGGAGACAAATAATCTCTT10.9900990099009901No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)