FastQCFastQC Report
Wed 8 May 2024
EGAF00005490991

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005490991
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences77105
Total Bases23.2 Mbp
Sequences flagged as poor quality0
Sequence length301
%GC52

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTATCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC1180.153038064976331No Hit
TCAACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC1170.15174113222229427No Hit
TCATCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC1170.15174113222229427No Hit
ACAACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC1160.15044419946825757No Hit
TTCTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC1140.14785033396018415No Hit
TTACCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC1130.14655340120614746No Hit
TCTTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC1130.14655340120614746No Hit
TCAACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC1130.14655340120614746No Hit
TTCTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC1100.14266260294403735No Hit
CTCTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC1100.14266260294403735No Hit
TTATCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC1090.14136567019000065No Hit
TAAACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC1090.14136567019000065No Hit
TTAACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC1090.14136567019000065No Hit
TTCACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC1080.14006873743596396No Hit
TATTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC1070.13877180468192724No Hit
TCATCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC1060.13747487192789054No Hit
AACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC1060.13747487192789054No Hit
TATACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC1060.13747487192789054No Hit
TTAACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC1050.13617793917385385No Hit
TTCACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC1050.13617793917385385No Hit
AAAACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC1050.13617793917385385No Hit
TACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC1050.13617793917385385No Hit
TCCACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC1050.13617793917385385No Hit
TACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC1040.13488100641981712No Hit
ACAACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC1030.13358407366578043No Hit
TCTACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC1030.13358407366578043No Hit
ACACCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC1030.13358407366578043No Hit
ATATCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC1030.13358407366578043No Hit
TTTTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC1020.1322871409117437No Hit
TAATCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC1020.1322871409117437No Hit
CACACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC1020.1322871409117437No Hit
ATCACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC1020.1322871409117437No Hit
ATTTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC1010.130990208157707No Hit
TAGTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC1010.130990208157707No Hit
GTATCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC1000.12969327540367032No Hit
AGCTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC1000.12969327540367032No Hit
ATGTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC1000.12969327540367032No Hit
CTTACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC990.12839634264963362No Hit
CTATCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC990.12839634264963362No Hit
CTTTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC980.12709940989559693No Hit
CACACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC980.12709940989559693No Hit
ATAACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC980.12709940989559693No Hit
TACACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC980.12709940989559693No Hit
CGGACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC980.12709940989559693No Hit
AAATCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC980.12709940989559693No Hit
CTAACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC970.1258024771415602No Hit
CTCACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC970.1258024771415602No Hit
TTTACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC970.1258024771415602No Hit
ACGTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC970.1258024771415602No Hit
CTCCCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC970.1258024771415602No Hit
TAACCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC970.1258024771415602No Hit
TCGACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC970.1258024771415602No Hit
TTTTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC970.1258024771415602No Hit
TAACCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC960.12450554438752351No Hit
CTTACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC960.12450554438752351No Hit
CTCACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC960.12450554438752351No Hit
GCAACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC960.12450554438752351No Hit
CAATCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC960.12450554438752351No Hit
CCATCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC950.1232086116334868No Hit
TGATCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC950.1232086116334868No Hit
TTACCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC950.1232086116334868No Hit
CAATCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC950.1232086116334868No Hit
TACACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC950.1232086116334868No Hit
TACCCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC950.1232086116334868No Hit
AACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC940.12191167887945009No Hit
GTCACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC940.12191167887945009No Hit
CATTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC930.1206147461254134No Hit
ATAACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC930.1206147461254134No Hit
TTTCCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC930.1206147461254134No Hit
GTAACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC930.1206147461254134No Hit
CCTTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC930.1206147461254134No Hit
ATGTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC930.1206147461254134No Hit
AAATCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC930.1206147461254134No Hit
TAGCCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC930.1206147461254134No Hit
ATCTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC920.11931781337137669No Hit
AAACCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC920.11931781337137669No Hit
ATGACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC920.11931781337137669No Hit
ATTACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC920.11931781337137669No Hit
ACTTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC920.11931781337137669No Hit
TTCCCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC920.11931781337137669No Hit
ACATCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC910.11802088061733998No Hit
CATACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC910.11802088061733998No Hit
AGAACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC910.11802088061733998No Hit
ACCCCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC910.11802088061733998No Hit
CTACCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC900.1167239478633033No Hit
CACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC900.1167239478633033No Hit
ATTTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC900.1167239478633033No Hit
TTGTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC900.1167239478633033No Hit
ACCACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC900.1167239478633033No Hit
TCACCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC900.1167239478633033No Hit
CTACCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC890.11542701510926659No Hit
CCAACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC890.11542701510926659No Hit
CACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC890.11542701510926659No Hit
TCCCCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC890.11542701510926659No Hit
CAACCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC890.11542701510926659No Hit
GTTACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC890.11542701510926659No Hit
CAAACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC880.1141300823552299No Hit
TAATCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC880.1141300823552299No Hit
CGATCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC880.1141300823552299No Hit
GTTTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC880.1141300823552299No Hit
TGAACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC880.1141300823552299No Hit
CAAACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC880.1141300823552299No Hit
CTTTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC880.1141300823552299No Hit
CTGACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC870.11283314960119319No Hit
ACATCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC870.11283314960119319No Hit
AGCACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC870.11283314960119319No Hit
GACACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC870.11283314960119319No Hit
TGCACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC870.11283314960119319No Hit
TATTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC870.11283314960119319No Hit
CCACCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC870.11283314960119319No Hit
GGATCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC860.11153621684715648No Hit
TTTACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC860.11153621684715648No Hit
CTAACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC860.11153621684715648No Hit
ATTACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC850.11023928409311977No Hit
GCAACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC850.11023928409311977No Hit
TCCACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC850.11023928409311977No Hit
ATATCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC850.11023928409311977No Hit
AATACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC850.11023928409311977No Hit
AAACCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC850.11023928409311977No Hit
TGTACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC850.11023928409311977No Hit
ACTACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC850.11023928409311977No Hit
ATCACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC850.11023928409311977No Hit
GGTTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC850.11023928409311977No Hit
TAAACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC840.10894235133908306No Hit
AACACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC840.10894235133908306No Hit
CCTACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC840.10894235133908306No Hit
TCCTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC840.10894235133908306No Hit
GTACCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC840.10894235133908306No Hit
TCCTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC840.10894235133908306No Hit
ATACCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC840.10894235133908306No Hit
TGCCCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC830.10764541858504637No Hit
AACACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC830.10764541858504637No Hit
GTGTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC820.10634848583100966No Hit
AGTACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC820.10634848583100966No Hit
CTATCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC820.10634848583100966No Hit
TTAGCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC820.10634848583100966No Hit
AAGTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC820.10634848583100966No Hit
CCCTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC820.10634848583100966No Hit
ATCTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC820.10634848583100966No Hit
TCGTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC820.10634848583100966No Hit
CCGTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC820.10634848583100966No Hit
ATACCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC810.10505155307697295No Hit
GGGACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC810.10505155307697295No Hit
ACCTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC810.10505155307697295No Hit
AATTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC810.10505155307697295No Hit
GATTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC810.10505155307697295No Hit
GCATCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC810.10505155307697295No Hit
CGAACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC810.10505155307697295No Hit
GTCACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC810.10505155307697295No Hit
TGGTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC810.10505155307697295No Hit
CCCACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC810.10505155307697295No Hit
CTTGCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC800.10375462032293625No Hit
GAGTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC800.10375462032293625No Hit
AAGACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC800.10375462032293625No Hit
GCACCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC800.10375462032293625No Hit
CGCTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC800.10375462032293625No Hit
TTGGCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC800.10375462032293625No Hit
AATACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC790.10245768756889956No Hit
CAACCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC790.10245768756889956No Hit
CGGTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC790.10245768756889956No Hit
GGAACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC790.10245768756889956No Hit
TGCTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC790.10245768756889956No Hit
CGTACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC780.10116075481486286No Hit
ACAGCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC780.10116075481486286No Hit
TTGACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC780.10116075481486286No Hit
CTCTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC780.10116075481486286No Hit
AAAACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC780.10116075481486286No Hit
TGCACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCC780.10116075481486286No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)