Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005491175 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 79877 |
Sequences flagged as poor quality | 0 |
Sequence length | 301 |
%GC | 48 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GCCCCTA | 85 | 0.0 | 295.00003 | 2 |
CGACCTA | 85 | 0.0 | 295.00003 | 2 |
GTCGCCT | 20 | 6.149094E-8 | 295.0 | 1 |
TGCCCCT | 40 | 0.0 | 295.0 | 1 |
GCGACCT | 10 | 8.4503094E-4 | 295.0 | 1 |
CGCGCCT | 20 | 6.149094E-8 | 295.0 | 1 |
GCGCCTA | 80 | 0.0 | 295.0 | 2 |
ACCCTAC | 495 | 0.0 | 295.0 | 3 |
GCACCCT | 25 | 5.275069E-10 | 295.0 | 1 |
CGCCTAG | 10 | 8.4503094E-4 | 295.0 | 3 |
TACGCCT | 25 | 5.275069E-10 | 295.0 | 1 |
CGGGCCT | 25 | 5.275069E-10 | 295.0 | 1 |
CTCGCCT | 25 | 5.275069E-10 | 295.0 | 1 |
CCGACCT | 20 | 6.149094E-8 | 295.0 | 1 |
TTGCCTA | 80 | 0.0 | 295.0 | 2 |
GTCCCTA | 125 | 0.0 | 295.0 | 2 |
GGACCTA | 115 | 0.0 | 295.0 | 2 |
CGGTAGG | 10 | 8.4503094E-4 | 295.0 | 9 |
GGCCTCG | 10 | 8.4503094E-4 | 295.0 | 3 |
GTGCCGG | 20 | 6.149094E-8 | 295.0 | 295 |