FastQCFastQC Report
Wed 8 May 2024
EGAF00005491191

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005491191
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences49516
Total Bases14.9 Mbp
Sequences flagged as poor quality0
Sequence length301
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTATCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC850.17166168511188304No Hit
TACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC810.16358348816544147No Hit
TTCACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC780.1575248404556103No Hit
CCATCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC760.15348574198238954No Hit
TATTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC760.15348574198238954No Hit
TTTTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC750.15146619274577913No Hit
GTATCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC750.15146619274577913No Hit
TAGTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC730.14742709427255835No Hit
TCATCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC710.1433879957993376No Hit
CAATCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC710.1433879957993376No Hit
ATCTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC710.1433879957993376No Hit
TCCACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC710.1433879957993376No Hit
TTAACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC700.14136844656272718No Hit
TTTACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC690.1393488973261168No Hit
GTTTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC690.1393488973261168No Hit
TAAACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC690.1393488973261168No Hit
TCAACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC680.13732934808950642No Hit
TTGTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC680.13732934808950642No Hit
ATATCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC670.135309798852896No Hit
ATACCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC660.13329024961628563No Hit
ACTTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC660.13329024961628563No Hit
TTCCCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC660.13329024961628563No Hit
CATACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC650.13127070037967525No Hit
AAATCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC650.13127070037967525No Hit
ACAACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC640.12925115114306485No Hit
TTTCCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC640.12925115114306485No Hit
CCCACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC640.12925115114306485No Hit
ACGTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC630.12723160190645447No Hit
TTACCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC630.12723160190645447No Hit
GTGTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC620.1252120526698441No Hit
CAAACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC620.1252120526698441No Hit
TTCTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC610.1231925034332337No Hit
AGCTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC610.1231925034332337No Hit
GTAACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC600.12117295419662331No Hit
ATTACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC600.12117295419662331No Hit
TACACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC600.12117295419662331No Hit
TGAACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC600.12117295419662331No Hit
TAATCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC600.12117295419662331No Hit
AAAACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC600.12117295419662331No Hit
TCCTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC600.12117295419662331No Hit
TCGTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC600.12117295419662331No Hit
CTCACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC590.11915340496001293No Hit
ACGACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC590.11915340496001293No Hit
CTATCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC590.11915340496001293No Hit
ATAACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC590.11915340496001293No Hit
CTAACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC590.11915340496001293No Hit
TGCCCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC580.11713385572340253No Hit
CTGTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC580.11713385572340253No Hit
ACCACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC580.11713385572340253No Hit
AACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC580.11713385572340253No Hit
AAACCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC580.11713385572340253No Hit
CGTACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC570.11511430648679215No Hit
AACACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC570.11511430648679215No Hit
TCGGCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC570.11511430648679215No Hit
TGCACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC570.11511430648679215No Hit
TGGTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC570.11511430648679215No Hit
TTTGCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC560.11309475725018177No Hit
CCAACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC560.11309475725018177No Hit
TTGACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC560.11309475725018177No Hit
GGGTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC560.11309475725018177No Hit
TCGCCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC560.11309475725018177No Hit
TCCGCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC560.11309475725018177No Hit
TCTTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC560.11309475725018177No Hit
ACATCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC550.11107520801357136No Hit
CGCACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC550.11107520801357136No Hit
TATACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC550.11107520801357136No Hit
TCAGCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC550.11107520801357136No Hit
AATACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC540.10905565877696098No Hit
AGGTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC540.10905565877696098No Hit
AATTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC540.10905565877696098No Hit
GATTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC540.10905565877696098No Hit
TAGACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC540.10905565877696098No Hit
GTCACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC540.10905565877696098No Hit
CGAACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC540.10905565877696098No Hit
AGATCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC530.1070361095403506No Hit
CATTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC530.1070361095403506No Hit
TTCGCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC530.1070361095403506No Hit
ACCTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC530.1070361095403506No Hit
CTTACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC530.1070361095403506No Hit
CTCTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC530.1070361095403506No Hit
ATCACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC530.1070361095403506No Hit
CTACCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC520.1050165603037402No Hit
TCTACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC520.1050165603037402No Hit
TAACCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC520.1050165603037402No Hit
TTAGCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC520.1050165603037402No Hit
AAGTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC520.1050165603037402No Hit
CTAGCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC520.1050165603037402No Hit
TGCTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC520.1050165603037402No Hit
CTTTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC510.10299701106712982No Hit
ATTTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC510.10299701106712982No Hit
CTGACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC510.10299701106712982No Hit
TGATCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC510.10299701106712982No Hit
CTCGCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC510.10299701106712982No Hit
CAGTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC510.10299701106712982No Hit
GGATCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC510.10299701106712982No Hit
TATCCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC510.10299701106712982No Hit
TGTTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC510.10299701106712982No Hit
GTAGCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC510.10299701106712982No Hit
CGTTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC510.10299701106712982No Hit
GTTACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC500.10097746183051944No Hit
AGAACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC500.10097746183051944No Hit
CCTACCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC500.10097746183051944No Hit
CCACCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCC500.10097746183051944No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)